Lin Wei, Zhang Liu, Huiting Zhang, Guolin Wang, Jun Weng, Linzhen Hu, Wei Wang, Shuai Li, Ke Ming, Zigong Wei. Shikonin Covalently Binding to Cysteine to Inhibits the Cleavage Activity of the 3C-like Serine Main Protease (Nsp4) of PRRSV-2 and Suppresses Viral Replication in Marc-145 Cells. npj Veterinary Sciences. Accepted
Fang Y, Wei L, Xing B, Wei Z*. SurfSol: A Multimodal Surface-Based Deep Learning Framework for Protein Solubility Prediction. J Chem Inf Model. 2026 Mar 17.
Weng J, Wu Z, Xing B, Hu Y, Hu X, Mei M, Xu J, Lu M, Chen Y, Wei L, Ming K, Wang Z, Li Z, Wei Z*. Design of minibinder proteins as universal antagonists against canine and human TNFα. Commun Biol. 2025 Nov 24;8(1):1639.
Liu Z#, Ming K#, Xing B#, Gan T, Bai L, Zhu J, Wei L, Wang Z, Zhang C, Cheng Y, Zhai C, Cai W, Wei Z*. De novo design mini-binder proteins targeting the capsid-forming domain of type 2 PRRSV nucleocapsid protein to inhibit PRRSV replication in vitro. Int J Biol Macromol. 2025, 323, 147118. (IF=8.5)
Wei L, Fang Y, Chen P, Wei Z*. Application of directed message-passing neural network to predict human oral bioavailability of pharmaceuticals. Journal of Computer-Aided Molecular Design. 2025, 39(1), 68. (IF=8.5)
Weng J, Hu Y, Wang K, Chen Y, Yang Y, Xing B, Ma L, Wei Z*. Minibinders targeting Staphylococcus aureus α-toxin exert protective effects in vivo. Int J Biol Macromol. 2025, 319: 145215. (IF=8.5)
Wei L, Hu Y, Liu Y, Xing B, Wang K, Weng J, Liu Z, Fang Y, Ming K, Mei M, Wei Z*. De novo design mini-binder proteins targeting the glycoproteins D to inhibit PRV replication in PK15 cells. Int J Biol Macromol. 2025, 315, 144403.
Wei L#, You Y#, Hu Y#, Wang K#, Zhao H#, Cheng Y, Zhu J, Weng J, Ren Y, Chen Y, Chen M, Chen X, Xing B, Bai L, Li H, Chen P, Wei Z*. Rapid discovery of pseudorabies virus inhibitors repurposed from the antimicrobial agent ciprofloxacin. Eur J Med Chem. 2025, 289, 117490.
Liu Z#, Yang Y#, Chen M#, Chen X#, Ming K#, Liu Y, Weng J, Xing B, Wei L, Wang Z, Wei Z*. De novo designed mini-binders targeting glyceraldehyde-3-phosphate dehydrogenase of Streptococcus equi ssp. zooepidemicus provided partial protection in mice model of infection. Int J Biol Macromol. 2025, 307, 142293. (IF=8.5)
Ke Ming#, Zhang Liu#, Xiujuan Chen#, Meiting Chen#, Yi Yang, Tongqi Gan,Longhao Wang, Keke Wang, Banbin Xing, Jun Weng, Lin Wei, Zhizheng Wang, Zigong Wei*. Mini-binders targeting Streptococcus equi ssp. zooepidemicus M-like protein inhibit the bacterial adhesion and exert protective effects in vivo. Int J Biol Macromol. 2025, 304, 140803. (IF=8.5)
Jun Weng#, Miaomiao Geng#, Xiaoyu Hu#, Yang Hu#, Yi Yang, Banbin Xing, Zhiyong Wu, Zigong Wei*. Design of minibinder proteins specific to TNFR1. Int J Biol Macromol. 2025, 293: 139403. (IF=8.5)
Lin Wei, Yang Hu, Licheng Bai, Chenxu Xiao, Zhang Liu, Yun You, Keke Wang, Yunyuan Huang, Junfei Zhu, Jun Weng, Wenling Zhou, Han Li, Honghe Zhao, Zhiyong Wu, Meng Mei, Zigong Wei*. Design of the inhibitors for pseudorabies virus replication by reinforcement learning from HSV-1 DNA polymerase inhibitors. ACS omega. 2025, 10(4), 3389-3397.
Wei L, Wu Y, Li S, Weng J, Geng M, Mei M, Wei Z*. In vitro enzyme characterization and several inhibitors for monkeypox virus core protease I7L. FEMS Microbiol Lett. 2025, 372:fnaf008.
Xingyu Wu, Tiantian Feng, Xiaohong Zhu, Dong Dong, Qinxue Gao, Shufan Huang, Rui Huang, Dong Wang, Huayu Xionga, Zigong Wei*, Yong Chen*, Jichao Liang*. Advanced Fe-COF-based photothermal cascade nano-generator for sterilization and promoting wound healing. Chemical Engineering Journal. 2024, 496: 154179. (中科院一区,IF=13.3)
Ke Ming#, Banbin Xing#, Xinyi Ren#, Yang Hu, Lin Wei, Zhizheng Wang, Meng Mei, Jun Weng, Zigong Wei*. De novo design of mini-binder proteins against IL-2 receptor β chain. Int J Biol Macromol. 2024, 276: 133834. (IF=8.5)
Mei Meng, Lu Mengqing, Li Shiqi, Ren Xinyi, Xing Banbin, Hu Yang, Wu Yuqi, Chen Huan, Wang Longhao, Yi Li, Ming Ke, Wei Zigong*. Development of nanobodies specific to clumping factors A of Staphylococcus aureus by yeast surface display. Int J Biol Macromol. 2024, 259: 129208. (IF=8.5)
Ming Ke#, Xing Banbin#, Hu Yang#, Mei Meng, Huang Wenli, Hu Xiaoyu, Wei Zigong*. De novo design of a protein binder against Staphylococcus enterotoxin B. Int J Biol Macromol. 2024, 257: 128666. (IF=8.5)
Jun Weng, Xiaoming Zhou, Pattama Wiriyasermkul, Zhenning Ren, Kehan Chen, Eva Gil-Iturbe, Ming Zhou, Matthias Quick. Insight into the mechanism of H + -coupled nucleobase transport. Proceedings of the National Academy of Sciences, 2023, 120(33). (中科院一区,IF=11.1)
Pan, Yaping; Weng, Jun; Kabaleeswaran, Venkataraman; Li, Huiguang; Cao, Yu; Bhosle, Rahul C.; Zhou, Ming ; Cortisone dissociates the Shaker family K+ channels from their beta subunits, Nature Chemical Biology, 2008, 4(11): 708-714 (中科院一区,IF=14.8)
Zhi-Zheng Wang, Chao Yi, Jun-Jie Huang, Teng-Fei Xu, Kang-Zhi Chen, Zu-Sheng Wang, Ya-Ping Xue, Jie-Lian Lu, Biao Nie, Ying-Jun Zhang, Chuan-Fei Jin, Ge-Fei Hao. Deciphering Non-bioavailable Substructures Improves the Bioavailability of Antidepressants by Serotonin Transporter. J. Med. Chem. 2023, 66, 1, 371-383. (中科院一区,IF: 7.3)
Ming Ke#, Hu Yang#, Zhu Meijun, Xing Banbin, Mei Meng, Wei Zigong*. Development of nanobodies against Staphylococcus enterotoxin B through yeast surface display. International Journal of Biological Macromolecules. 2023, 253: 126822. (IF=8.5)
Wei L., Xu M., Liu Z., Jiang C., Lin X., Hu Y., Wen X., Zou R., Peng C., Lin H., Wang G., Yang L., Fang L., Yang M., Zhang P., Hit Identification Driven by Combining Artificial Intelligence and Computational Chemistry Methods: A PI5P4K-β Case Study. J. Chem. Inf. Model., 2023, 63, 5341-5355.
Zhi-Zheng Wang, Xing-Xing Shi, Guang-Yi Huang, Ge-Fei Hao, Guang-Fu Yang. Fragment-based drug discovery supports drugging ‘undruggable’ protein-protein interactions. Trends Biochem. Sci. 2023, 48, 539-552. (IF=13.8)
Zhou Tong#, Luqi Kong#, Yuexing Zhang, Tianhui Hu, Rongrong Dai, Yilan Wang, Juan Ji, Zhiyong Huang*, Linzhen Hu*. Brassisterol A, A New Ergosterol from Co-cultivation of Fungi Attenuates Neuroinflammation via Targeting NLRP3/Caspase-1/GSDMD Pathway. Bioorganic Chemistry, 2024;142, 106955.
Ping Hu#, Linzhen Hu#, Yizhan Chen#, Fuqian Wang, Yang Xiao, Zhou Tong, Hua Li, Ming Xiang, Qingyi Tong*, Yonghui Zhang*. Chaetocochin J exhibits anti-hepatocellular carcinoma effect independent of hypoxia. Bioorganic Chemistry. 2023;139, 106701.
Wei L., Chen Y., Liu J., Rao L., Ren Y., Xu X., Wan J., Cov_DOX: A Method for Structure Prediction of Covalent Protein−Ligand Bindings, J. Med. Chem. 2022, 65, 5528−5538. (IF=8.039, 中科院一区,Top期刊)
Zhi-Zheng Wang, Ming-Shu Wang, Fan Wang, Xing-Xing Shi, Wei Huang, Ge-Fei Hao, Guang-Fu Yang. Exploring the kinase-inhibitor fragment interaction space facilitates the discovery of kinase inhibitor overcoming resistance by mutations. Brief. Bioinform. 2022, 23. bbac203. (中科院一区,IF: 9.5)
Zhi-Zheng Wang, Chao Yi, Kang-Zhi Chen, Tao Wang, Kang Deng, Chuan-Fei Jin, Ge-Fei Hao. Enhancing monoamine oxidase B inhibitory activity via chiral fluorination: Structure-activity relationship, biological evaluation, and molecular docking study. Eur. J. Med. Chem. 2022, 228, 114025.
Zhi-Zheng Wang, Xing-Xing Shi, Guang-Yi Huang, Ge-Fei Hao, Guang-Fu Yang. Fragment-based drug design facilitates selective kinase inhibitor discovery. Trends Pharmacol. Sci. 2021, 42, 551-565. (IF: 13.8)
Ke Ming; Wenjuan Yuan; Yun Chen; Hongxu Du; Miao He; Yuanliang Hu; Deyun Wang; Yi Wu; Jiaguo Liu ; PI3KC3-dependent autophagosomes formation pathway is of crucial importance to anti- DHAV activity of Chrysanthemum indicum polysaccharide, Carbohydrate Polymers, 2019, 208: 22-31. (中科院一区,IF=11.2)
Wei L., Chi B., Ren Y., Rao L., Wu J., Shang H., Liu J., Xiao Y., Ma M., Xu X., Wan J., Conformation Search Across Multiple-Level Potential-Energy Surfaces (CSAMP): A Strategy for Accurate Prediction of Protein–Ligand Binding Structures, J. Chem. Theory Comput., 2019, 15, 4264-4279. (IF=6.578,中科院一区,Top期刊)
Huang Y#., Wei L#., Han X., Chen H., Ren Y., Xu Y., Song R., Rao L., Su C., Peng C., Feng L., Wan J., Discovery of novel allosteric site and covalent inhibitors of FBPase with potent hypoglycemic effects, Eur. J. Med. Chem., 2019, 184, 11179. (IF=7.088,中科院一区,Top期刊)
Tang, B. , Liang, H. , Zhao, P. , & Wei, Z. . (2017). Mir-194b-3p partially inhibits streptococcus equi subsp. zooepidemicus adherence to pk15 cells. Veterinary Microbiology, 210, 38-42.
Liang, H., Tang, B. , Zhao, P. , Deng, M. , Yan, L. , Zhai, P. , & Wei, Z. G. (2018). Identification and characterization of a novel protective antigen, sec_205 of streptococcus equi ssp. zooepidemicus. Vaccine, 36(6), 788-793.
Gao, X. J., Tang, B. , Liang, H. H. , Yi, L. , & Wei, Z. G. (2019). Selenium deficiency inhibits micrna-146a to promote ros-induced inflammation via regulation of the mapk pathway in the head kidney of carp. Fish & Shellfish Immunology, 91, 284-292.